Search results for "Enthalpy–entropy compensation"

showing 3 items of 3 documents

Enthalpy/entropy compensation effects from cavity desolvation underpin broad ligand binding selectivity for rat odorant binding protein 3

2014

Evolution has produced proteins with exquisite ligand binding specificity, and manipulating this effect has been the basis for much of modern rational drug design. However, there are general classes of proteins with broader ligand selectivity linked to function, the origin of which is poorly understood. The odorant binding proteins (OBPs) sequester volatile molecules for transportation to the olfactory receptors. Rat OBP3, which we characterize by X-ray crystallography and NMR, binds a homologous series of aliphatic gamma-lactones within its aromatic-rich hydrophobic pocket with remarkably little variation in affinity but extensive enthalpy/entropy compensation effects. We show that the bin…

Models Molecular[SDV.BIO]Life Sciences [q-bio]/BiotechnologyOdorant bindingolfactory receptor[ SDV.AEN ] Life Sciences [q-bio]/Food and NutritionEnthalpywaterDrug designCrystallography X-RayLigandsReceptors Odorantentropy compensationBiochemistryHydrophobic effectLactonesdifferent chemical classessiteAnimalsMoleculeNuclear Magnetic Resonance Biomolecularisotopically enriched proteinsbiologyChemistrycarbonic-anhydrase[ SDV.BIO ] Life Sciences [q-bio]/BiotechnologyLigand (biochemistry)RatsCrystallographyEnthalpy–entropy compensationSolventsOdorant-binding proteinbiology.proteinBiophysicsThermodynamicsidentificationrecognitionsolvent reorganization[SDV.AEN]Life Sciences [q-bio]/Food and NutritionProtein Binding
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Thermodynamics of binding between α- and β-cyclodextrins and some p-nitro-aniline derivatives: reconsidering the enthalpy–entropy compensation effect

2004

Abstract The thermodynamics of binding between native α- and β-cyclodextrin towards several p -nitro-aniline derivatives was examined, in order to gain further insights about the occurrence of different interaction modes for the two hosts. Valuable information was achieved regarding the ‘expanded hydrophobic sphere’ of α-cyclodextrin. Furthermore, very interesting and unexpected aspects of the behavior of β-cyclodextrin were enlightened, such as the crucial role played by hydrogen bond interactions. Experimental data were examined under the perspective of the ‘enthalpy–entropy compensation effect’, and some ideas about this topic are discussed.

binding equlibria cyclodextrinchemistry.chemical_compoundAnilinechemistryEnthalpy–entropy compensationHydrogen bondOrganic ChemistryDrug DiscoveryNitroThermodynamicsSettore CHIM/06 - Chimica Organicaβ cyclodextrinsBiochemistryTetrahedron
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Gas-liquid chromatography and lipophilicity of esters of benzoic acids

1987

Abstract The use of gas-liquid chromatographic (GLC) retention indices for the determination of lipophilicity was studied for a series of alkyl and arylalkyl esters of substituted benzoic acids. The regression relationships between the logarithms of the partition coefficients and the retention characteristics measured on two cpillary columns, SE-30 and OV-351, were evaluated. The behaviour of arylalkyl esters and of alkyl esters cannot be expressed in terms of a single regression equation. This is probably a consequence of the effect of the intramolecular hydrophobic interaction upon the retention of arylalkyl esters under GLC conditions. An analysis of the isokinetic relationships revealed…

chemistry.chemical_classificationChromatographyChemistryOrganic ChemistryGeneral MedicineBiochemistryAnalytical ChemistryHydrophobic effectPartition coefficientEnthalpy–entropy compensationIntramolecular forceLipophilicityKovats retention indexOrganic chemistryGas chromatographyAlkylJournal of Chromatography A
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